Downloads

Current Assembly and Official Gene Set

Version 1.0

Files Description
Dsuzukii_v1_scaffolds.fa.gz Scaffolds from the first assembly of the Drosophila Suzukii genome
Dsuz-1.0.1.gff.gz Genome Annotation GFF
Dsuzukii_OGS10_transcripts.fa.gz Predicted transcripts from OGS1.0
Dsuzukii_OGS10_proteins.fa.gz Predicted proteins from OGS1.0
D.suz.both.sex.Assembly.transcriptome.fasta.zip Transcriptome assembly (full)
D.suz.female.denovo.Assembly.transcriptome.fasta.gz Transcriptome assembly (female)
D.suz.male.denovo.Assembly.transcriptome.fasta.gz Transcriptome assembly (male)
sha1sum.txt File SHA1 checksums

Other Datasets

SNP and Indel analysis for Georgia field and laboratory SWD collections (Mishra et al. unpublished)

Files Description
output_Fcombined_snpeffindel_SIFTpredictions.vcf.gz
output_Fcombined_snpeffindel.vcf.gz
Field population Indels
output_Fcombined_snpeffsnp_SIFTpredictions.vcf.gz
output_Fcombined_snpeffsnp.vcf.gz
Field population SNPs
output_Lcombined_snpeffindel_SIFTpredictions.vcf.gz
output_Lcombined_snpeffindel.vcf.gz
Lab population Indels
output_Lcombined_snpeffsnp_SIFTpredictions.vcf.gz
output_Lcombined_snpeffsnp.vcf.gz
Lab population SNPs