Downloads
Current Assembly and Official Gene Set
Version 1.0
| Files | Description |
|---|---|
| Dsuzukii_v1_scaffolds.fa.gz | Scaffolds from the first assembly of the Drosophila Suzukii genome |
| Dsuz-1.0.1.gff.gz | Genome Annotation GFF |
| Dsuzukii_OGS10_transcripts.fa.gz | Predicted transcripts from OGS1.0 |
| Dsuzukii_OGS10_proteins.fa.gz | Predicted proteins from OGS1.0 |
| D.suz.both.sex.Assembly.transcriptome.fasta.zip | Transcriptome assembly (full) |
| D.suz.female.denovo.Assembly.transcriptome.fasta.gz | Transcriptome assembly (female) |
| D.suz.male.denovo.Assembly.transcriptome.fasta.gz | Transcriptome assembly (male) |
| sha1sum.txt | File SHA1 checksums |
Other Datasets
SNP and Indel analysis for Georgia field and laboratory SWD collections (Mishra et al. unpublished)
| Files | Description |
|---|---|
| output_Fcombined_snpeffindel_SIFTpredictions.vcf.gz output_Fcombined_snpeffindel.vcf.gz |
Field population Indels |
| output_Fcombined_snpeffsnp_SIFTpredictions.vcf.gz output_Fcombined_snpeffsnp.vcf.gz |
Field population SNPs |
| output_Lcombined_snpeffindel_SIFTpredictions.vcf.gz output_Lcombined_snpeffindel.vcf.gz |
Lab population Indels |
| output_Lcombined_snpeffsnp_SIFTpredictions.vcf.gz output_Lcombined_snpeffsnp.vcf.gz |
Lab population SNPs |